bowang-lab
WangLab @ U of T Joined May 2019 View on GitHub
- Stars
- 12,164
- across 64 public repos
- Rank
- #3,170
- of 94,827 organizations, top 4%
- Down 165 places this week
Repositories with 50+ stars
| Rank | Repository | Language | Stars |
|---|---|---|---|
| 14,754 | Segment Anything in Medical Images | Jupyter Notebook | 4,444 |
| 41,185 | Jupyter Notebook | 1,663 | |
| 54,111 | MedRAX: Medical Reasoning Agent for Chest X-ray - ICML 2025 | Python | 1,257 |
| 64,605 | U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation | Python | 1,032 |
| 87,989 | MedSAM2: Segment Anything in 3D Medical Images and Videos | Python | 738 |
| 150,777 | BioReason: Incentivizing Multimodal Biological Reasoning within a DNA-LLM Model | NeurIPS '25 | Jupyter Notebook | 406 |
| 168,517 | Graph-Mamba: Towards Long-Range Graph Sequence Modelling with Selective State Spaces | Python | 358 |
| 170,996 | EchoJEPA: A Latent Predictive Foundation Model for Echocardiography | Python | 352 |
| 183,804 | An electrocardiogram analysis foundation model. | Python | 324 |
| 193,208 | 3D Slicer Plugin for Segment anything in medical images | Python | 306 |
| 362,233 | Jupyter Notebook | 144 | |
| 386,337 | Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifically designed for long-sequence data, such as RNA. | Python | 133 |
| 398,367 | BioReason-Pro: Advancing Protein Function Prediction with Multimodal Biological Reasoning | Jupyter Notebook | 128 |
| 525,778 | This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "End-to-end Named Entity Recognition and Relation Extraction... | Jupyter Notebook | 90 |
| 525,778 | Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning | Python | 90 |
| 671,363 | Biological Network Integration using Convolutions | Python | 66 |
| 696,124 | AGILE Platform: A Deep Learning-Powered Approach to Accelerate LNP Development for mRNA Delivery | Jupyter Notebook | 63 |
| 704,738 | Integrate Any Omics: Towards genome-wide data integration for patient stratification | Jupyter Notebook | 62 |
| 785,742 | Python | 54 | |
| 809,321 | Python | 52 |
Among 94,827 organizations
10k–16k stars: 1,461 organizations, including bowang-lab
Stars along the bottom, and organizations in each band on a log scale
Where the stars are
Languages
- Jupyter Notebook 7k stars, 58% · 8 repos
- Python 4.8k stars, 39% · 12 repos
When they were made
20 repos with 50+ stars, made between 2019 and 2026
Quick stats
- Next rank
- +2 stars to reach #3,169
- Next milestone
- +22,809 stars to reach the top 1%
- Public repos
- 64, 20 with 50+ stars
- Popular repos
- 13 over 100 stars, 4 over 1k stars
- Top repo
- MedSAM, #14,754 of all repos, 37% of stars
- Smaller repos
- 402 stars from repos under 50